[Mristudio-users] Importing ROI into Fiber Tracking Function of DTI Studio

[Xin Li]

You need to modify the map file in order to load the binary maps into DtiStudio. Please take a look at this explanation at https://www.mristudio.org/wiki/faq#head-f80df539228dfb62e6fa6c79bef04491eb2f8db6


Xin
________________________________
From: Radhika Teli <radhikateli24 at gmail.com>
Sent: Monday, June 8, 2015 2:32 PM
To: DTI Studio, ROI Editor, DiffeoMap Questions/Support; Xin Li
Subject: Re: [Mristudio-users] Importing ROI into Fiber Tracking Function of DTI Studio

When I choose the Binary Map option, it saves as multiple .dat files. DTIStudio ROI function of Fiber Tracking does not recognize these files.

Thank you,
Radhika

On Mon, Jun 8, 2015 at 2:25 PM, Xin Li <xli16 at jhmi.edu<mailto:xli16 at jhmi.edu>> wrote:

If you have loaded the map as ROI in ROIEditor, you can use the function "Save ROI" to save your map as binary maps. Please take a look at this manual at https://www.mristudio.org/wiki/user_manual/roieditor/ROIDraw_Load_Save .





Xin

________________________________
From: mristudio-users <mristudio-users-bounces at mristudio.org<mailto:mristudio-users-bounces at mristudio.org>> on behalf of Radhika Teli <radhikateli24 at gmail.com<mailto:radhikateli24 at gmail.com>>
Sent: Monday, June 8, 2015 1:42 PM
To: DTI Studio, ROI Editor, DiffeoMap Questions/Support
Subject: Re: [Mristudio-users] Importing ROI into Fiber Tracking Function of DTI Studio

Hello,

I have imported my segmented object map into ROI editor (Analyze .img format converted to raw (.dat) format. How can I convert this to binary map in ROI editor so I can load the binary map image in DTI Studio?

Thanks,

On Wed, Apr 29, 2015 at 10:19 AM, Xin Li <xli16 at jhmi.edu<mailto:xli16 at jhmi.edu>> wrote:

Please take a look at this explanation at https://www.mristudio.org/wiki/faq#head-f80df539228dfb62e6fa6c79bef04491eb2f8db6



________________________________
From: mristudio-users <mristudio-users-bounces at mristudio.org<mailto:mristudio-users-bounces at mristudio.org>> on behalf of Radhika Teli <radhikateli24 at gmail.com<mailto:radhikateli24 at gmail.com>>
Sent: Monday, April 13, 2015 4:21 PM
To: mristudio-users at mristudio.org<mailto:mristudio-users at mristudio.org>
Subject: [Mristudio-users] Importing ROI into Fiber Tracking Function of DTI Studio

Hello,

I have been segmenting the corpus callosum into six segments in Analyze Software 12.0. Each segment has been saved as an object map and also in Analyze format (.hdr and .img).

I am trying to perform tractography of each segment using the Fiber Tracking tool in DTI Studio, but I am unable to load the segments (each ROI) into the Fiber Tracking function. If possible, I would like to avoid tracing each segment in FiberTracking because it may alter the accuracy of the data.

Please let me know if there is a way I can import each of my segments (as ROI) into the FiberTracking tool of DTI Studio in order to perform tractography and obtain FA values.

Thanks,
Radhika Teli


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--
Radhika Teli
University of Cincinnati College of Medicine 2019
614.517.4656<tel:614.517.4656>

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Radhika Teli
University of Cincinnati College of Medicine 2019
614.517.4656
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