[Mristudio-users] FA map problem

susumu mori susumu at mri.jhu.edu
Fri Jun 22 10:56:52 EDT 2012


well, you can always do image-domain interpolation. I'm not sure if it
looks as pretty as the time-domain interpolation by scanners. Some people
say that they are the same thing.

One thing I can comment is, if you will use our atlas-based pipeline for
image quantification, regardless of your image resolution, they are all
resampled to 1x1x1 mm / 181x217x181, as defined by the MNI coordinates. So,
you can just proceed to our MriStudio pipeline without any interpolation.
You feed in your 2.5 mm resolution data and 1mm data will come out.

On Fri, Jun 22, 2012 at 9:29 AM, Jiang, Jie <jie.jiang at emory.edu> wrote:

>  Thanks for the response. So you mean I have to do this when I was doing
> the scan and  there is no way to optimize the images during the
> processing?Thanks
>  ------------------------------
> *From:* mristudio-users-bounces at mristudio.org [
> mristudio-users-bounces at mristudio.org] on behalf of susumu mori [
> susumu at mri.jhu.edu]
> *Sent:* Thursday, June 21, 2012 6:17 PM
> *To:* DTI Studio, ROI Editor, DiffeoMap Questions/Support
> *Subject:* Re: [Mristudio-users] FA map problem
>
>  I recommend to do 2x interpolation (time-domain, not image-domain
> interpolation, also called zerofilling or zeropadding) at the data
> acquisition.  Unfortunately, you have to do this in the scanner.
>
> On Thu, Jun 21, 2012 at 5:55 PM, Jiang, Jie <jie.jiang at emory.edu> wrote:
>
>>  Dear all,
>> I am using DTIStudio to get the FA image. The primary images are ok.
>> However, after calculating, the FA maps are always much blur with pretty
>> low resolution. Does anyone know how to improve the resolution or any
>> suggestion? Thanks a lot.
>> Best,
>> Jie
>>
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