[Mristudio-users] FW: Using ROI editor

[Xin Li]

After you got Kimap.vtk and Hmap.vtk from the lddmm server, did you transform FA and a WMPM in DiffeoMap?

In ROIEditor, you can right click a roi object in the roi object list and choose "Export pixel value", it will give you the FA values of this roi object as a text file.


Xin

----- Original Message -----
From: Nida Sajjad <nidasajjad958 at hotmail.com>
Date: Sunday, May 12, 2013 10:47 am
Subject: FW: Using ROI editor
To: "DTI Studio, ROI Editor,	DiffeoMap QuestionsSupport" <mristudio-users at mristudio.org>, "xli16 at jhmi.edu" <xli16 at jhmi.edu>


>  
>  
>  
>  
>  
>  
>  Dear All,
>  I am sorry may be i am not able to explain my problem exactly. The 
> data you are seeing in attached files is just from some tutorial its 
> not my original data. i was just trying to explain that  i am 
> following thee steps as mentioned in the pictures. After multichanel 
> processing of my data, i got results which contain following files: 
>  finalMetricDistance,
>  Hmap.vtk, 
>  Hmap_001.vtk
>  Hmap_002.vtk
>  Hmap_003.vtk
>  ,identity,
>  Kimap.vtk  
>  Kimap_001.vtk
>  Kimap_002.vtk  
>  Kimap_003.vtk  
>  lddmm-vmm1.conf  
>  lddmm-vmm2.conf 
>  lddmm-vmm3.conf     
>  LocalAddress   
>   stdout  
>  Target1.img  
>  Target2.img  
>  Template1.img
>  Template2.img
>  Now when i want to use my Updated FA in Roi editor and upload Rois 
> they are not fully fit to my data. How can i use the above mentioned 
> processed data in Roi editor. This is what i want to ask. And also 
> that the roi statistics contain pixel value , min max and mean and std 
> deviation. Are these the FA values for each Roi?
>  
>  I hope now i am able to make my self clear.
>  Thank you much
>  
>  Regards,
>  Nida
>  
>  
>  
>  
>  
>  
>  
>                                                                         
>