[Mristudio-users] reading NRRD

Syam Gadde gadde at biac.duke.edu
Wed Mar 6 10:59:30 EST 2013


Hello,

We have a user that's trying to use DTIStudio with our .nrrd files.

The error he's getting is:

   "NRRD-DWMRI file read error"

I have no idea why it doesn't like the file, but I'm hoping someone 
will.  I have included the header portion of the .nrrd file below.  It 
reads fine in some other tools (DTIPrep, for example).  Many thanks!

-syam

NRRD0005
# Complete NRRD file format specification at:
# http://teem.sourceforge.net/nrrd/format.html
type: unsigned short
dimension: 4
space: left-posterior-superior
sizes: 31 256 256 58
space directions: none 
(0.99999699999999991,0.0021668,-0.00082398699999999987) 
(0.0021362999999999998,-0.998861,-0.047669400000000001) 
(0.00182456134168,-0.095315782920499997,1.99772456531)
kinds: vector domain domain domain
endian: little
encoding: gzip
space origin: (-129.76682615000001,102.80506889999999,-19.800480293500001)
measurement frame: 
(0.99999700000000002,0.0021668,-0.00082398699999999998) 
(-0.0021362999999999998,0.998861,0.047669400000000001) 
(-0.00091228160000000002,0.047657940000000003,-0.99886330000000001)
DWMRI_b-value:=1000.0
DWMRI_gradient_0000:= 0.000000     0.000000     0.000000
DWMRI_gradient_0001:= 1.000000    -0.000547     0.000065
DWMRI_gradient_0002:= 0.167098     0.985814    -0.000488
DWMRI_gradient_0003:=-0.109240     0.663660     0.740417
DWMRI_gradient_0004:= 0.900771    -0.419793    -0.108849
DWMRI_gradient_0005:=-0.169749    -0.601654     0.780334
DWMRI_gradient_0006:=-0.813016    -0.390786     0.432436
DWMRI_gradient_0007:= 0.656820     0.363996     0.660293
DWMRI_gradient_0008:= 0.582403     0.799716     0.142952
DWMRI_gradient_0009:= 0.900513     0.256768     0.350326
DWMRI_gradient_0010:= 0.692364    -0.698622     0.178036
DWMRI_gradient_0011:= 0.357037    -0.923882    -0.140680
DWMRI_gradient_0012:= 0.543592    -0.488113    -0.682448
DWMRI_gradient_0013:=-0.523566    -0.401907     0.750865
DWMRI_gradient_0014:=-0.641909     0.685370     0.342848
DWMRI_gradient_0015:=-0.330301    -0.013838    -0.943883
DWMRI_gradient_0016:=-0.523955    -0.783791     0.333216
DWMRI_gradient_0017:= 0.608924    -0.066013    -0.790975
DWMRI_gradient_0018:= 0.221657    -0.232713    -0.946684
DWMRI_gradient_0019:=-0.003802    -0.909659    -0.415749
DWMRI_gradient_0020:=-0.512317     0.627055    -0.587796
DWMRI_gradient_0021:= 0.414976     0.734671     0.537442
DWMRI_gradient_0022:=-0.679461     0.136056    -0.721127
DWMRI_gradient_0023:= 0.884606    -0.296415     0.360175
DWMRI_gradient_0024:= 0.264300     0.427917     0.864332
DWMRI_gradient_0025:= 0.088658     0.183667    -0.979192
DWMRI_gradient_0026:= 0.294037    -0.907721     0.299788
DWMRI_gradient_0027:= 0.886737    -0.088077    -0.453694
DWMRI_gradient_0028:= 0.256193    -0.449798     0.855702
DWMRI_gradient_0029:= 0.084457     0.867239    -0.490846
DWMRI_gradient_0030:= 0.862581     0.504662    -0.026088
modality:=DWMRI



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