[Mristudio-users] Question about importing fiber tracking findings from DTI Studio to MATLAB for group statistics

[melcarr at umich.edu]

Dr. Mori,

Thank you for your immediate response! If not MATLAB, what software  
packages would you recommend for pursuing the group statistics /  
analysis?

Thank you,

-Melisa Carrasco

--

Melisa Carrasco, M.S.
MD/PhD Student, Year Grad-4 (Ph.D. Candidate)

University of Michigan, Neuroscience Graduate Program, Class of 2012
University of Rochester School of Medicine and Dentistry, Class of 2014

About me: http://sitemaker.umich.edu/melisa.carrasco/home
GO BLUE!


Quoting susumu mori <susumu at mri.jhu.edu>:

> That should be feasible, although we don't have experiences in the
> Step #3 with a MatLab code. We do Step #3 using our programs in
> MriStudio family, DiffoeMap and RoiEditor. These programs can be
> downloaded from www.mristudio.org and you can also find some tutorial
> materials there.
>
> On Tue, May 17, 2011 at 9:11 PM, Melisa Carrasco <melcarr at umich.edu> wrote:
>> Hello,
>>
>> We're relatively new to DTI-Studio and were wondering: Would anyone happen
>> to have a protocol to be able to do the following?
>>
>> We'd like, using DTI-Studio, to:
>>
>> 1. Define two ROIs in each individual subject's FA map
>> 2. Run fiber tracking / tractography so we can find the fiber tracts that
>> intersect both ROIs
>> 3. Extract these fibers for each individual, then load these into MATLAB for
>> group statistics...
>>
>> Just wondering if this is even feasible to do.
>>
>> Thank you,
>>
>> -Melisa Carrasco
>>
>> --
>>
>> Melisa Carrasco, M.S.
>> MD/PhD Student, Year Grad-4 (Ph.D. Candidate)
>>
>> University of Michigan, Neuroscience Graduate Program, Class of 2012
>> University of Rochester School of Medicine and Dentistry, Class of 2014
>>
>> About me: http://sitemaker.umich.edu/melisa.carrasco/home
>> GO BLUE!
>>
>>
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