[Mristudio-users] difference between JHU_MNI_SS_FA and JHU_MNI_SS_FA_ss

[Risen, Sarah]

No, So I am guessing that it did not go through?  

-----Original Message-----
From: mristudio-users-bounces at mristudio.org [mailto:mristudio-users-bounces at mristudio.org] On Behalf Of Xin Li
Sent: Wednesday, July 21, 2010 10:07 AM
To: DTI Studio, ROI Editor, DiffeoMap Questions/Support
Subject: Re: [Mristudio-users] difference between JHU_MNI_SS_FA and JHU_MNI_SS_FA_ss

Hello Sarah,

After you sent the data, did you receive an email that told you the lddmm job is processing?


Xin



----- Original Message -----
From: "Risen, Sarah" <risen at kennedykrieger.org>
Date: Wednesday, July 21, 2010 10:03 am
Subject: Re: [Mristudio-users] difference between	JHU_MNI_SS_FA	and JHU_MNI_SS_FA_ss
To: "DTI Studio, ROI Editor,	DiffeoMap Questions/Support" <mristudio-users at mristudio.org>


> Yesterday at 3 pm we did the initial multichannel LDDMM and typed my 
> email.  In the tutorial, they said results are emailed in 30 min - 5 
> hours.  Is this an accurate time frame?  Is there a contact if we have 
> not received a reply email in >15 hours? Thank you. sarah
>  
>  From: mristudio-users-bounces at mristudio.org [ On Behalf Of susumu mori
>  Sent: Wednesday, July 21, 2010 8:34 AM
>  To: DTI Studio, ROI Editor, DiffeoMap Questions/Support
>  Subject: Re: [Mristudio-users] difference between JHU_MNI_SS_FA and JHU_MNI_SS_FA_ss
>  
>  "SS" means "single-subject", while "ss" means "skull stripped".
>  
>  Sorry for the confusing nomenclature.
>  If your data is skull stripped, you should use "ss" atlas.
>  Usually linear transformation works between non-skull stripped data. 
> However, sometimes some extra signal such as sinus interferes with the 
> registration. In this case, you may need to do registration between 
> skull-stripped images.
>  For LDDMM, it is safe to use skull-stripped images.
>  On Tue, Jul 20, 2010 at 5:44 PM, Josselin <j.houenou at yahoo.fr<>> wrote:
>  Hi,
>  In many files provided, some have the letters "_ss" attached to them. 
> What does it mean ? e.g. what's the difference between JHU_MNI_SS_FA 
> and JHU_MNI_SS_FA_ss ?
>  thanks,
>  Josselin
>  
>  
>  
>  
>  
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