[Mristudio-users] Importing Siemens slice dicom images to dtistudio

[susumu mori]

Oh I see. I'm not sure why Naama wants it....

On Fri, Apr 30, 2010 at 2:34 PM, Ashtari, Manzar <ASHTARI at email.chop.edu>wrote:

>   I know what Naama is asking for.  Siemens images come in mosaic form and
> she wants to have them none mosaic.  I know you can convert them on the
> scanner but don't know of any program that does it in a lab setting.
>
>
> Best,
>
> MA
>  *
>
> *
> ------------------------------
> *From:* mristudio-users-bounces at mristudio.org [
> mristudio-users-bounces at mristudio.org] On Behalf Of susumu mori [
> susumu at mri.jhu.edu]
> *Sent:* Friday, April 30, 2010 12:25 PM
> *To:* DTI Studio, ROI Editor, DiffeoMap Questions/Support; Hangyi Jiang
> *Subject:* Re: [Mristudio-users] Importing Siemens slice dicom images to
> dtistudio
>
>  Naama,
>
> I'm not exactly sure about what you are asking but maybe related to what I
> experienced in the past?
>
> For Siemens, GE, and Philips, I got an impression that you need a research
> agreement to store DICOM files into separate directories based on imaging
> type such as T1, T2, DTI. If you run scans and burn a CD for clinical
> purpose, you find DICOM files all mixed up in 1 or multiple directories with
> a generic names, from which it is very difficult to sort. These CD usually
> includes a DICOM viewer and you need to use it for the viewing purpose.
>
> So, I would first check if your scanner has an option to save DICOM in
> separate directories based on the modalities. If not, we wrote a small
> program to sort out the clinical DICOM files. We don't use this very often
> and may not work for some type of operating systems, but you can at least
> give it a try. Please contact Hangyi if you want it.
>
> Susumu
>
>
> On Fri, Apr 30, 2010 at 10:46 AM, Ashtari, Manzar <ASHTARI at email.chop.edu>wrote:
>
>> Yes you will have a separate series listed along with others.
>> Best,
>>
>> MA
>> ________________________________________
>> From: mristudio-users-bounces at mristudio.org [
>> mristudio-users-bounces at mristudio.org] On Behalf Of Naama Barnea-Goraly [
>> naamab at stanford.edu]
>>  Sent: Friday, April 30, 2010 10:16 AM
>> To: DTI Studio, ROI Editor, DiffeoMap Questions/Support
>> Subject: Re: [Mristudio-users] Importing Siemens slice dicom images to
>>  dtistudio
>>
>> Thank you - is there a way to separate them off the scanner?
>>
>> Thanks,
>>
>> Naama
>>
>>
>>
>> On Apr 30, 2010, at 6:53 AM, Ashtari, Manzar wrote:
>>
>> > This is done as an option on the scanner. You can also perform this
>> > after the images are reconstructed.
>> > Best,
>> >
>> > MA
>> > ________________________________________
>> > From: mristudio-users-bounces at mristudio.org [
>> mristudio-users-bounces at mristudio.org
>> > ] On Behalf Of Naama Barnea-Goraly [naamab at stanford.edu]
>> > Sent: Friday, April 30, 2010 9:41 AM
>> > To: DiffeoMap Questions/Support DTI Studio ROI Editor
>> > Subject: [Mristudio-users] Importing Siemens slice dicom images to
>> > dtistudio
>> >
>> > The output from the Siemens scanner are slice dicom images. How do I
>> > separate them into individual images like the ones we get from GE?
>> >
>> > Thanks,
>> >
>> > Naama
>> >
>> >
>> >
>> >
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>>
>> Naama Barnea-Goraly M.D.
>> Instructor
>> Center for Interdisciplinary Brain Sciences Research
>> Stanford University Division of Child and Adolescent Psychiatry
>> 401 Quarry Rd. MC 5795
>> Stanford University School of Medicine
>> Stanford, CA  94305-5795
>> Phone: (650) 736-1874, fax: (650) 724-4794
>>
>>
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>>
>>
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