Oh I see. I'm not sure why Naama wants it....<br><br><div class="gmail_quote">On Fri, Apr 30, 2010 at 2:34 PM, Ashtari, Manzar <span dir="ltr"><<a href="mailto:ASHTARI@email.chop.edu">ASHTARI@email.chop.edu</a>></span> wrote:<br>
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<div><font face="AR CENA" size="4">I know what Naama<a></a> is asking for. Siemens<a></a> images come in mosaic form and she wants to have them none mosaic. I know you can convert them on the scanner but don't know of any program that does it in a lab setting.</font></div>
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<div><font face="AR CENA" size="4"></font> </div>
<div><font face="AR CENA" size="4">Best,</font></div>
<div><font face="AR CENA" size="4"></font> </div>
<div><font face="AR CENA" size="4">MA</font></div>
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<font color="#000000" face="Tahoma" size="2"><b>From:</b> <a href="mailto:mristudio-users-bounces@mristudio.org" target="_blank">mristudio-users-bounces@mristudio.org</a> [<a href="mailto:mristudio-users-bounces@mristudio.org" target="_blank">mristudio-users-bounces@mristudio.org</a>] On Behalf Of susumu mori [<a href="mailto:susumu@mri.jhu.edu" target="_blank">susumu@mri.jhu.edu</a>]<br>
<b>Sent:</b> Friday, April 30, 2010 12:25 PM<br>
<b>To:</b> DTI Studio, ROI Editor, DiffeoMap Questions/Support; Hangyi Jiang<br>
<b>Subject:</b> Re: [Mristudio-users] Importing Siemens slice dicom images to dtistudio<br>
</font><br>
</div>
<div></div>
<div>Naama,<br>
<br>
I'm not exactly sure about what you are asking but maybe related to what I experienced in the past?<br>
<br>
For Siemens, GE, and Philips, I got an impression that you need a research agreement to store DICOM files into separate directories based on imaging type such as T1, T2, DTI. If you run scans and burn a CD for clinical purpose, you find DICOM files all mixed
up in 1 or multiple directories with a generic names, from which it is very difficult to sort. These CD usually includes a DICOM viewer and you need to use it for the viewing purpose.<br>
<br>
So, I would first check if your scanner has an option to save DICOM in separate directories based on the modalities. If not, we wrote a small program to sort out the clinical DICOM files. We don't use this very often and may not work for some type of operating
systems, but you can at least give it a try. Please contact Hangyi if you want it.<br>
<br>
Susumu<br>
<br>
<br>
<div class="gmail_quote">On Fri, Apr 30, 2010 at 10:46 AM, Ashtari, Manzar <span dir="ltr">
<<a href="mailto:ASHTARI@email.chop.edu" target="_blank">ASHTARI@email.chop.edu</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
Yes you will have a separate series listed along with others.<br>
<div>Best,<br>
<br>
MA<br>
________________________________________<br>
From: <a href="mailto:mristudio-users-bounces@mristudio.org" target="_blank">mristudio-users-bounces@mristudio.org</a> [<a href="mailto:mristudio-users-bounces@mristudio.org" target="_blank">mristudio-users-bounces@mristudio.org</a>] On Behalf Of Naama Barnea-Goraly [<a href="mailto:naamab@stanford.edu" target="_blank">naamab@stanford.edu</a>]<br>
</div>
Sent: Friday, April 30, 2010 10:16 AM<br>
To: DTI Studio, ROI Editor, DiffeoMap Questions/Support<br>
Subject: Re: [Mristudio-users] Importing Siemens slice dicom images to dtistudio<br>
<div>
<div></div>
<div><br>
Thank you - is there a way to separate them off the scanner?<br>
<br>
Thanks,<br>
<br>
Naama<br>
<br>
<br>
<br>
On Apr 30, 2010, at 6:53 AM, Ashtari, Manzar wrote:<br>
<br>
> This is done as an option on the scanner. You can also perform this<br>
> after the images are reconstructed.<br>
> Best,<br>
><br>
> MA<br>
> ________________________________________<br>
> From: <a href="mailto:mristudio-users-bounces@mristudio.org" target="_blank">mristudio-users-bounces@mristudio.org</a> [<a href="mailto:mristudio-users-bounces@mristudio.org" target="_blank">mristudio-users-bounces@mristudio.org</a><br>
> ] On Behalf Of Naama Barnea-Goraly [<a href="mailto:naamab@stanford.edu" target="_blank">naamab@stanford.edu</a>]<br>
> Sent: Friday, April 30, 2010 9:41 AM<br>
> To: DiffeoMap Questions/Support DTI Studio ROI Editor<br>
> Subject: [Mristudio-users] Importing Siemens slice dicom images to<br>
> dtistudio<br>
><br>
> The output from the Siemens scanner are slice dicom images. How do I<br>
> separate them into individual images like the ones we get from GE?<br>
><br>
> Thanks,<br>
><br>
> Naama<br>
><br>
><br>
><br>
><br>
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Naama Barnea-Goraly M.D.<br>
Instructor<br>
Center for Interdisciplinary Brain Sciences Research<br>
Stanford University Division of Child and Adolescent Psychiatry<br>
401 Quarry Rd. MC 5795<br>
Stanford University School of Medicine<br>
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