Hi,<div><br></div><div>Just wanted to renovate this question. It is not clear to me how to backproject TRS files, or whether I should do it for the whole WMPM type II atlas.</div><div><br></div><div>The only way I could make atlas fiber tracking now is by projecting tensors in normalized and by manually creating a .map file for rois of a fasciculus. The TRS that are for download don't work in DTIstudio.</div>
<div><br></div><div>Thank you.</div><div><br></div><div>Dorian<br><br><div class="gmail_quote">2013/1/30 Dorian P. <span dir="ltr"><<a href="mailto:alb.net@gmail.com" target="_blank">alb.net@gmail.com</a>></span><br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi all,<div><br></div><div>I am trying to do atlas based tract reconstruction based on Zhang Yajing (2010) paper. I have performed LDDMM and need to backproject a Template Roi Set (say the uncinate). The files in the TRS look like this: </div>
<div><br></div><div><div>ROI_display.roihdr</div><div>AND_#1.dat</div><div>NOT.dat</div><div>OR.dat</div><div>ROI_display.dat</div></div><div><br></div><div>I tried loading the these files in Diffeomap but there are no white pixels, all black. So, how ca I do this back projection?</div>
<div><br></div><div><br></div><div>And is there an automatic way to massively invert TRS's in native space or do I have to go one by one for each TRS to open and save in Diffeomap.</div><div><br></div><div><br></div>
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Thank you.</div>
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