Hi, Andreas<div><br></div><div>You can find the fiber atlas in: <a href="http://lbam.med.jhmi.edu/cmrm/Data_Yajing/fiberMenu.htm">http://lbam.med.jhmi.edu/cmrm/Data_Yajing/fiberMenu.htm</a></div><div>The components of SLF can be downloaded in: <a href="http://lbam.med.jhmi.edu/cmrm/Data_Yajing/longAssociation.htm">http://lbam.med.jhmi.edu/cmrm/Data_Yajing/longAssociation.htm</a></div>
<div>The corresponding paper is: "Atlas-guided tract reconstruction for automated and comprehensive examination of the white matter anatomy." Neuroimage 52(4):1289-1301 (2010). </div><div><br></div><div><br></div>
<div>Best regards,</div><div>Yajing</div><div><br></div><div><br></div><div><br><div class="gmail_quote">On Fri, Jul 22, 2011 at 7:44 PM, susumu mori <span dir="ltr"><<a href="mailto:susumu@mri.jhu.edu">susumu@mri.jhu.edu</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;">Hi Andreas,<div><br></div><div>With 2-2.5mm resolution, the external and extreme capsules are difficult to separate, but I agree that IFO seems to occupy a good portion of these structures.</div>
<div><br></div><div>As for the different sections of the SLF, please refer to Yajing Zhang's paper in NeuroImage about the automated tractography. She created probabilistic maps of the different sections of the SLF in our atlas, which are available for download. Please contact Yajing about the location of the files. They may be already included in RoiEditor but I need to ask Xin.</div>
<div><br></div><div>MdLF is currently not defined in our atlas.</div><div><br></div><div>Susumu<br><br><div class="gmail_quote">On Fri, Jul 22, 2011 at 10:58 AM, Andreas Horn <span dir="ltr"><<a href="mailto:mail@andreas-horn.de" target="_blank">mail@andreas-horn.de</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hello everybody, dear Susumu,<br>
<br>
I have read your response about IFO and SFO (<a href="http://lists.mristudio.org/pipermail/mristudio-users/2011/001928.html" target="_blank">http://lists.mristudio.org/pipermail/mristudio-users/2011/001928.html</a>).<br>
<br>
Now I still wonder what anatomical structures are most likely included (or with which ones the cut-set is biggest) in IFO.<br>
When I look at the tract, it seems that the extreme capsule is definitely included, most likely also parts of external capsule, possibly uncinatus. Is this correct?<br>
<br>
I would also be very glad about three-dimensional data of the MdLF as delineated in Makris 2009 and/or the partialized SLF (I-III plus AF) but can't seem to find them anywhere. Do you have any ideas how to get access to these files?<br>
<br>
All I want to do is to assign our tracts to anatomical structures.<br>
<br>
Thank you so much for your help!<br>
<br>
Yours, sincerely, Andreas Horn<br>
<br>
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