In DtiStudio, eddy/motion correction is done simultaneously using AIR affine transformation. The default setting is to create a duplicate data that are AIRed which have AIR_xxx name. So, all b0 and DWIs are duplicated. You can save these images. You can then reload these images to calculate FA and other DTI matrices that are eddy/motion corrected. <br>
<br><div class="gmail_quote">On Thu, Jun 17, 2010 at 11:16 AM, Rajagopalan, Venkateswaran <span dir="ltr"><<a href="mailto:rajagov2@ccf.org">rajagov2@ccf.org</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">
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<div><font size="2" color="#000000" face="Arial">Dear All,</font></div>
<div><font size="2" face="Arial"></font> </div>
<div><font size="2" face="Arial">I am wondering how to get dti data (all B0 and DW images) after eddy current and motion correction steps or in fact the images which are in same space as FA or other DTI metrics in DTI studio. I need these images in order to register them with anatomical datasets.</font></div>
<div><font size="2" face="Arial"></font> </div>
<div><font size="2" face="Arial">Thanks </font> </div>
<div> </div>
<div><font size="2" face="Arial">Venkat</font></div>
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