I appreciate all your efforts on this.<br><br>-SC<br><br><div class="gmail_quote">On Mon, May 18, 2009 at 2:17 PM, Hua KG <span dir="ltr"><<a href="mailto:khua1@jhu.edu">khua1@jhu.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
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Hi, SC<br>
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I was trying to write a manual for the program. Once, I wrote it up, I'll give to Xin and she can put it online.<br>
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Thank for your interests!<br>
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Date: Fri, 15 May 2009 16:16:39 -0400<br>From: <a href="mailto:choisj70@gmail.com" target="_blank">choisj70@gmail.com</a><div class="im"><br>Subject: Re: [Mristudio-users] save and read fiber in Amira format<br></div>To: <a href="mailto:mristudio-users@mristudio.org" target="_blank">mristudio-users@mristudio.org</a><div>
<div></div><div class="h5"><br><br>I could not find the 3D viewer for Amira format in the MRI <a href="http://studio.org/" target="_blank">studio.org</a>.<br>Is there anyone who already received reply from Kegang with the 3D viewer?<br>
I am waiting for reply from Kegang Hua.<br><br>-SC<br><br>
<div>On Tue, May 12, 2009 at 5:10 PM, susumu <span dir="ltr"><<a href="mailto:susumu@mri.jhu.edu" target="_blank">susumu@mri.jhu.edu</a>></span> wrote:<br>
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<font size="2" color="navy" face="Arial"><span style="font-size: 10pt; color: navy; font-family: Arial;">You can try our 3D viewer. It has only limited functions but it works.</span></font><br>
<font size="2" color="navy" face="Arial"><span style="font-size: 10pt; color: navy; font-family: Arial;"> </span></font><br>
<font size="2" color="navy" face="Arial"><span style="font-size: 10pt; color: navy; font-family: Arial;">You can get it from Kegang Hua.</span></font><br>
<font size="2" color="navy" face="Arial"><span style="font-size: 10pt; color: navy; font-family: Arial;"> </span></font><br>
<font size="2" color="navy" face="Arial"><span style="font-size: 10pt; color: navy; font-family: Arial;">Xin, is it possible to post this handy 3D visualization software in the MriStudio.org website?</span></font><br>
<font size="2" color="navy" face="Arial"><span style="font-size: 10pt; color: navy; font-family: Arial;"> </span></font><br>
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<b><font size="2" face="Tahoma"><span style="font-weight: bold; font-size: 10pt; font-family: Tahoma;">From:</span></font></b><font size="2" face="Tahoma"><span style="font-size: 10pt; font-family: Tahoma;"> <a href="mailto:mristudio-users-bounces@mristudio.org" target="_blank">mristudio-users-bounces@mristudio.org</a> [mailto:<a href="mailto:mristudio-users-bounces@mristudio.org" target="_blank">mristudio-users-bounces@mristudio.org</a>] <b><span style="font-weight: bold;">On Behalf Of </span></b>[Seongjin]<br>
<b><span style="font-weight: bold;">Sent:</span></b> Tuesday, May 12, 2009 12:30 PM<br><b><span style="font-weight: bold;">To:</span></b> Yi Jiang; DTI Studio, ROI Editor, Landmarker Questions/Support<br><b><span style="font-weight: bold;">Subject:</span></b> Re: [Mristudio-users] save and read fiber in Amira format</span></font><br>
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<p style="margin-bottom: 12pt;"><font size="3" face="Times New Roman"><span style="font-size: 12pt;">Dear users using Amira,<br><br>Is there any other way to see Amira format without purchase of Amira SW?<br>For example, free viewer for Amira formatted file.<br>
Thanks in advance.<br><br>-SC<br><br></span></font></p>
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<font size="3" face="Times New Roman"><span style="font-size: 12pt;">On Mon, May 11, 2009 at 4:52 PM, Yi Jiang <<a href="mailto:yj3@duke.edu" target="_blank">yj3@duke.edu</a>> wrote:</span></font><br>
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<font size="2" face="Arial"><span style="font-size: 10pt; font-family: Arial;">Hello, dear all,</span></font><br></div>
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<font size="2" face="Arial"><span style="font-size: 10pt; font-family: Arial;">I tried to select multiple fiber tracts in multiple colors (say, the final selected fibers are from 20 ROIs and in 8 colors). I saved the "selected fibers" in amira format. I tried to load the fiber file in Amira. It was loaded in with no complaint. I then displayed the fibers as lineSetView in Amira. But all the lines displayed with the same color, instead of the 8 colors I would hope.</span></font><br>
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<font size="2" face="Arial"><span style="font-size: 10pt; font-family: Arial;">My questions are: are the fiber color (labels or indices) saved in the amira format? If yes, how can I display them in different colors as in DTIstudio?</span></font><br>
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<font size="2" face="Arial"><span style="font-size: 10pt; font-family: Arial;">Thank you very much!</span></font><br></div>
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<font size="2" face="Arial"><span style="font-size: 10pt; font-family: Arial;">Best,</span></font><br></div>
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<font size="2" face="Arial"><span style="font-size: 10pt; font-family: Arial;">Yi</span></font><br></div>
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