[Mristudio-users] CST atlas

Rajagopalan, Venkateswaran rajagov2 at ccf.org
Wed Sep 22 11:18:24 EDT 2010


Dear All,

I am using CST probability atlas for some calculations (i.e. measuring FA values along CST), since the CST atlas includes probability values ranging from 0 to 1, I want to exclude very low probability values like 0.00002 I tried using Percentile ( since It will not raise concerns when I write an article say I want to retain say between 5% and 95%) however since many voxels have very low probability values this is not working good in the sense for 95 percentile my probability value comes to 0.1745 however the probability values range from 0.0 to 0.578 so all the higher probability values above 0.1745 will get rejected. Any suggestions will be of great help.

Thanks

Venkat

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