[Mristudio-users] save and read fiber in Amira format

[Xin Xu]

Hi Yi,

 

The email of Kegang Hua is khua1 at jhu.edu  .

 

Thanks,

Xin

 

-----Original Message-----
From: mristudio-users-bounces at mristudio.org
[mailto:mristudio-users-bounces at mristudio.org] On Behalf Of Yi Jiang
Sent: Tuesday, May 12, 2009 5:54 PM
To: DTI Studio, ROI Editor, Landmarker Questions/Support
Subject: Re: [Mristudio-users] save and read fiber in Amira format

 

Thank you very much. How can I contact Kegang Hua to get 3DViewer?

 

Thank you!

 

Yi

 

----- Original Message ----- 

From: susumu <mailto:susumu at mri.jhu.edu>  

To: 'DTI Studio, ROI Editor, Landmarker
<mailto:mristudio-users at mristudio.org>  Questions/Support' 

Sent: Tuesday, May 12, 2009 5:10 PM

Subject: Re: [Mristudio-users] save and read fiber in Amira format

 

You can try our 3D viewer. It has only limited functions but it works.

 

You can get it from Kegang Hua.

 

Xin, is it possible to post this handy 3D visualization software in the
MriStudio.org website?

 


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From: mristudio-users-bounces at mristudio.org
[mailto:mristudio-users-bounces at mristudio.org] On Behalf Of [Seongjin]
Sent: Tuesday, May 12, 2009 12:30 PM
To: Yi Jiang; DTI Studio, ROI Editor, Landmarker Questions/Support
Subject: Re: [Mristudio-users] save and read fiber in Amira format

 

Dear users using Amira,

Is there any other way to see Amira format without purchase of Amira SW?
For example, free viewer for Amira formatted file.
Thanks in advance.

-SC

On Mon, May 11, 2009 at 4:52 PM, Yi Jiang <yj3 at duke.edu> wrote:

Hello, dear all,

 

I tried to select multiple fiber tracts in multiple colors (say, the final
selected fibers are from 20 ROIs and in 8 colors). I saved the "selected
fibers" in amira format. I tried to load the fiber file in Amira. It was
loaded in with no complaint. I then displayed the fibers as lineSetView in
Amira. But all the lines displayed with the same color, instead of the 8
colors I would hope.

 

My questions are: are the fiber color (labels or indices) saved in the amira
format? If yes, how can I display them in different colors as in DTIstudio?

 

Thank you very much!

 

Best,

Yi

 

 


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