[Mristudio-users] Is there any method to load NIfTi data in DTI Mapping module?

[李猛]

I find Hangyi said that  "DTI Mapping" does not accept Analyze DWIs, for
NRRD, the header should follow the NRRD-DWMRI format, not the NRRD format,
they are not same. for RAW format, it is supposed that each file contains
only one image volume, so that you need to put all image files into one
folder in  [Mristudio-users] NRRD format.So I save the analyze file again.
Each file contains only one image volume ,that is, b0+15 direction  means 16
raw data files in the same directory. Then I click "DTI Mapping", check "Raw
files", the error bar hints "File size is less than
expected:ImgWidth*ImgHeigth*2bytes+header... "
Is there anything wrong?

On Tue, Dec 16, 2008 at 10:21 AM, 李猛 <albertleemon at gmail.com> wrote:

> Dear all:
>
> I am grateful for all your help.
> I try the following:
> First，I use mricro to save GE DICOMs to the FSL(4D Nifti nii).After eddy
> correction, I use mricro to save the *.nifti-gz as the dual files
> (.hdr/.img), and then load them into DTI Studio as Analyze format.It works
> in the MRI view3D module.
>
> Then, in the MRI view3D module, I convert analyze to raw format. So I
> select all(B0+15 directions) files in the "Image you have " window to "raw
> data" format. Then click "DTI Mapping", check "Raw files", the error bar
> hints "Numbers of files in this fold is less than
> expected:(Img_Slices*Img_Blocks)... "
>
> I wonder whether we should save only one volume every time?Or I make any
> other mistake?
>
>
>
> On Tue, Dec 16, 2008 at 12:27 AM, Hangyi Jiang <hjiang at jhmi.edu> wrote:
>
>> save the Nifti as the dual files (.hdr/.img), and then load them into
>> DTI Studio as Analyze format.
>>
>>
>>
>>
>> >>> 李猛 <albertleemon at gmail.com> 12/15/08 9:32 AM >>>
>> Dear all
>>
>>
>> Hi.
>>
>> If I use the AIR module to do eddy correction, It always crashes! So I
>> turn
>> to FlAIR module in FSL. If It means I can't use DTIStudio anymore in the
>> follow-up produces?Is there any method to load NIfTi data in DTI Mapping
>> module?
>>
>> Which software can convert the  NIfTi data into  Raw or NRRD
>> format?Please
>> let me know..
>>
>> Thanks a lot!
>>
>>
>> --
>> albert
>> _______________________________________________
>> Mristudio-users mailing list
>> Mristudio-users at mristudio.org
>> http://lists.mristudio.org/mailman/listinfo/mristudio-users
>>
>
>
>
> --
> albert
>
>
>


-- 
李猛
Lab of Complex System and Artificial Intelligence,
Institute of Automation,Chinese Academy of Sciences(CASIA)
Beijing, 100190,P.R.CHINA
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